SNP Profiles matching ICS 6

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	AG	CG	TT	CT	AA	CC	TT	CC	CT	AA	AA	CC	AA	CT
1._RUQ_721	AA	CG	TT	_	_	_	TT	_	_	_	_	CC	AA	_
2._RUQ_1572	AA	CG	TT	_	_	_	TT	_	_	_	_	CC	AA	_
3._PA_205_[PER]	AA	GG	TT	TT	AA	CC	TT	CC	TT	AA	AA	CC	AA	CT
4._ICS_6	AA	GG	TT	TT	AA	CC	TT	CC	_	TT	AA	CC	AA	CT

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	AA	GG	TT	CC	CC	GG	AG	CT	AC	CC	TT	CT	CC	AA
1._RUQ_721	_	_	_	CC	CC	GG	_	CT	AA	CC	TT	CT	CC	AA
2._RUQ_1572	_	_	_	CC	CC	GG	_	CT	AA	CC	TT	CT	CC	AA
3._PA_205_[PER]	AA	GG	TT	CC	CC	-	AG	CT	AA	CC	TT	CT	CC	AA
4._ICS_6	AA	GG	TT	CC	CC	GG	AG	CT	AC	CC	TT	CT	CC	AA

	29	30	31	32	33	34	35	36	37	38	39
_Input profile	GG	AT	CC	GG	CC	AA	CC	GT	CC	AT	GG	X_X	X_X	X_X
1._RUQ_721	_	AT	CC	GG	CC	AA	CC	GT	CC	_	_	X_X	X_X	X_X
2._RUQ_1572	_	AT	CC	GG	CC	AA	CC	GT	CC	_	_	X_X	X_X	X_X
3._PA_205_[PER]	GG	AT	CC	GG	CC	AA	CC	GT	CC	AT	GG	X_X	X_X	X_X
4._ICS_6	GG	AT	CC	GG	_	AA	CC	GT	CC	AT	GG	X_X	X_X	X_X

Input profile: ICS_6 RUQ_721

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2016

1._ICS_6 RUQ_721

95.8 %
24 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

2._NA_399 RUQ_1572

95.8 %
24 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

3._PA_205_[PER]

93.4 %
38 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: MARPER D 715

Dapeng Zhang, 2014

4._ICS_6

93.2 %
37 shared markers

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International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: 6B E281 T2

Dapeng Zhang, 2016

Key to SNP Markers

Key to SNP Markers

1	TcSNP1484	2	TcSNP1458	3	TcSNP1442	4	TcSNP1414	5	TcSNP1350
6	TcSNP1270	7	TcSNP1253	8	TcSNP1165	9	TcSNP1144	10	TcSNP1075
11	TcSNP1062	12	TcSNP1060	13	TcSNP998	14	TcSNP994	15	TcSNP953
16	TcSNP929	17	TcSNP917	18	TcSNP891	19	TcSNP872	20	TcSNP723
21	TcSNP645	22	TcSNP619	23	TcSNP591	24	TcSNP577	25	TcSNP560
26	TcSNP534	27	TcSNP529	28	TcSNP469	29	TcSNP429	30	TcSNP372
31	TcSNP242	32	TcSNP230	33	TcSNP226	34	TcSNP193	35	TcSNP151
36	TcSNP150	37	TcSNP144	38	TcSNP32	39	TcSNP25